A set of SPARQL examples that are used in different SIB resources
protein, annotation, catalytic activity and reaction
PREFIX up: <http://purl.uniprot.org/core/>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
SELECT ?protein ?annotation ?ca ?reaction
WHERE {
?protein up:annotation ?annotation.
?annotation up:catalyticActivity ?ca.
?ca up:catalyzedReaction ?reaction.
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
v2("?annotation"):::projected
v3("?ca"):::projected
v1("?protein"):::projected
v4("?reaction"):::projected
v1 --"up:annotation"--> v2
v2 --"up:catalyticActivity"--> v3
v3 --"up:catalyzedReaction"--> v4