sparql-examples

A set of SPARQL examples that are used in different SIB resources

View the Project on GitHub ytirlet/sparql-examples

M39_module

rq turtle/ttl

protein, annotation, catalytic activity and reaction

Use at

PREFIX up: <http://purl.uniprot.org/core/>
  PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
SELECT ?protein ?annotation ?ca ?reaction
WHERE {
        ?protein up:annotation ?annotation.
        ?annotation up:catalyticActivity ?ca.
        ?ca up:catalyzedReaction ?reaction.
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v2("?annotation"):::projected 
  v3("?ca"):::projected 
  v1("?protein"):::projected 
  v4("?reaction"):::projected 
  v1 --"up:annotation"-->  v2
  v2 --"up:catalyticActivity"-->  v3
  v3 --"up:catalyzedReaction"-->  v4