A set of SPARQL examples that are used in different SIB resources
Sachem query
PREFIX up: <http://purl.uniprot.org/core/>
PREFIX sachem: <http://bioinfo.uochb.cas.cz/rdf/v1.0/sachem#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
SELECT
?chebi ?query
WHERE {
SERVICE <https://idsm.elixir-czech.cz/sparql/endpoint/chebi> {
?chebi sachem:substructureSearch [
sachem:query ?query ].
}
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
v2("?chebi"):::projected
v1("?query"):::projected
a1((" "))
subgraph s1["https://idsm.elixir-czech.cz/sparql/endpoint/chebi"]
style s1 stroke-width:4px;
a1 --"sachem:query"--> v1
v2 --"sachem:substructureSearch"--> a1
end