M73_module

rq turtle/ttl

• gene name

protein and gene

Use at

• https://sparql.uniprot.org/sparql/

PREFIX up: <http://purl.uniprot.org/core/>
PREFIX skos: <http://www.w3.org/2004/02/skos/core#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
SELECT ?protein ?gene ?name ?locusName
WHERE {
        ?protein rdf:type up:Protein.
        ?protein up:encodedBy ?gene.
        ?gene skos:prefLabel ?name.
        ?gene up:locusName ?locusName.
}

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v2("?gene"):::projected 
  v4("?locusName"):::projected 
  v3("?name"):::projected 
  v1("?protein"):::projected 
  c2(["up:Protein"]):::iri 
  v1 --"a"-->  c2
  v1 --"up:encodedBy"-->  v2
  v2 --"skos:prefLabel"-->  v3
  v2 --"up:locusName"-->  v4