A set of SPARQL examples that are used in different SIB resources
compound to ChEBI
PREFIX up: <http://purl.uniprot.org/core/>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
PREFIX rh: <http://rdf.rhea-db.org/>
SELECT ?chebi ?compound ?superchebi
WHERE {
?compound (rh:chebi|(rh:reactivePart/rh:chebi)|(rh:underlyingChebi/rh:chebi)) ?chebi .
?chebi (rdfs:subClassOf)+ ?superchebi.
}
graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
v2("?chebi"):::projected
v1("?compound"):::projected
v3("?superchebi"):::projected
a1((" "))
a2((" "))
subgraph union0[" Union "]
subgraph union0l[" "]
style union0l fill:#abf,stroke-dasharray: 3 3;
subgraph union1[" Union "]
subgraph union1l[" "]
style union1l fill:#abf,stroke-dasharray: 3 3;
v1 --"rh:underlyingChebi"--> a2
a2 --"rh:chebi"--> v2
end
subgraph union1r[" "]
style union1r fill:#abf,stroke-dasharray: 3 3;
v1 --"rh:reactivePart"--> a1
a1 --"rh:chebi"--> v2
end
union1r <== or ==> union1l
end
end
subgraph union0r[" "]
style union0r fill:#abf,stroke-dasharray: 3 3;
v1 --"rh:chebi"--> v2
end
union0r <== or ==> union0l
end
v2 --"rdfs:subClassOf"--> v3